Adaptation of Pandemic H2N2 Influenza A Viruses in Humans
Identifieur interne : 000754 ( Main/Exploration ); précédent : 000753; suivant : 000755Adaptation of Pandemic H2N2 Influenza A Viruses in Humans
Auteurs : Udayan Joseph [Singapour] ; Martin Linster [Singapour, Pays-Bas] ; Yuka Suzuki [Singapour] ; Scott Krauss [États-Unis] ; Rebecca A. Halpin [États-Unis] ; Dhanasekaran Vijaykrishna [Singapour] ; Thomas P. Fabrizio [États-Unis] ; Theo M. Bestebroer [Pays-Bas] ; Sebastian Maurer-Stroh [Singapour] ; Richard J. Webby [États-Unis] ; David E. Wentworth [États-Unis] ; Ron A. M. Fouchier [Pays-Bas] ; Justin Bahl [Singapour, États-Unis] ; Gavin J. D. Smith [Singapour, États-Unis]Source :
- Journal of Virology [ 0022-538X ] ; 2014.
Descripteurs français
- KwdFr :
- ARN viral (génétique), Adaptation biologique, Analyse de séquence d'ADN, Animaux, Données de séquences moléculaires, Flambées de maladies, Grippe chez les oiseaux (virologie), Grippe chez les oiseaux (épidémiologie), Grippe humaine (virologie), Grippe humaine (épidémiologie), Humains, Oiseaux, Sous-type H2N2 du virus de la grippe A (génétique), Variation génétique, Zoonoses (virologie), Zoonoses (épidémiologie), Évolution moléculaire.
- MESH :
- génétique : ARN viral, Sous-type H2N2 du virus de la grippe A.
- virologie : Grippe chez les oiseaux, Grippe humaine, Zoonoses.
- épidémiologie : Grippe chez les oiseaux, Grippe humaine, Zoonoses.
- Adaptation biologique, Analyse de séquence d'ADN, Animaux, Données de séquences moléculaires, Flambées de maladies, Humains, Oiseaux, Variation génétique, Évolution moléculaire.
English descriptors
- KwdEn :
- Adaptation, Biological, Animals, Birds, Disease Outbreaks, Evolution, Molecular, Genetic Variation, Humans, Influenza A Virus, H2N2 Subtype (genetics), Influenza in Birds (epidemiology), Influenza in Birds (virology), Influenza, Human (epidemiology), Influenza, Human (virology), Molecular Sequence Data, RNA, Viral (genetics), Sequence Analysis, DNA, Zoonoses (epidemiology), Zoonoses (virology).
- MESH :
- chemical , genetics : RNA, Viral.
- epidemiology : Influenza in Birds, Influenza, Human, Zoonoses.
- genetics : Influenza A Virus, H2N2 Subtype.
- virology : Influenza in Birds, Influenza, Human, Zoonoses.
- Adaptation, Biological, Animals, Birds, Disease Outbreaks, Evolution, Molecular, Genetic Variation, Humans, Molecular Sequence Data, Sequence Analysis, DNA.
Abstract
The 1957 A/H2N2 influenza virus caused an estimated 2 million fatalities during the pandemic. Since viruses of the H2 subtype continue to infect avian species and pigs, the threat of reintroduction into humans remains. To determine factors involved in the zoonotic origin of the 1957 pandemic, we performed analyses on genetic sequences of 175 newly sequenced human and avian H2N2 virus isolates and all publicly available influenza virus genomes.
Url:
DOI: 10.1128/JVI.02590-14
PubMed: 25505070
PubMed Central: 4338906
Affiliations:
- Pays-Bas, Singapour, États-Unis
- Caroline du Nord, Hollande-Méridionale, Maryland, Tennessee, Texas
- Rotterdam
- Université nationale de Singapour
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Le document en format XML
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Halpin</name><affiliation wicri:level="2"><nlm:aff id="aff4">J. Craig Venter Institute, Rockville, Maryland, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>J. Craig Venter Institute, Rockville, Maryland</wicri:regionArea><placeName><region type="state">Maryland</region></placeName></affiliation></author><author><name sortKey="Vijaykrishna, Dhanasekaran" sort="Vijaykrishna, Dhanasekaran" uniqKey="Vijaykrishna D" first="Dhanasekaran" last="Vijaykrishna">Dhanasekaran Vijaykrishna</name><affiliation wicri:level="1"><nlm:aff id="aff1">Duke-NUS Graduate Medical School, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>Duke-NUS Graduate Medical School</wicri:regionArea></affiliation><affiliation wicri:level="4"><nlm:aff id="aff5">Yong Loo Lin School of Medicine, National University of Singapore, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>Yong Loo Lin School of Medicine, National University of Singapore</wicri:regionArea><orgName type="university">Université nationale de Singapour</orgName></affiliation></author><author><name sortKey="Fabrizio, Thomas P" sort="Fabrizio, Thomas P" uniqKey="Fabrizio T" first="Thomas P." last="Fabrizio">Thomas P. Fabrizio</name><affiliation wicri:level="2"><nlm:aff id="aff3">Virology Division, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Virology Division, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Bestebroer, Theo M" sort="Bestebroer, Theo M" uniqKey="Bestebroer T" first="Theo M." last="Bestebroer">Theo M. Bestebroer</name><affiliation wicri:level="3"><nlm:aff id="aff2">Department of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, Rotterdam</wicri:regionArea><placeName><settlement type="city">Rotterdam</settlement><region nuts="2" type="province">Hollande-Méridionale</region></placeName></affiliation></author><author><name sortKey="Maurer Stroh, Sebastian" sort="Maurer Stroh, Sebastian" uniqKey="Maurer Stroh S" first="Sebastian" last="Maurer-Stroh">Sebastian Maurer-Stroh</name><affiliation wicri:level="1"><nlm:aff id="aff6">Bioinformatics Institute, Agency for Science, Technology and Research, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>Bioinformatics Institute, Agency for Science, Technology and Research</wicri:regionArea><wicri:noRegion>Technology and Research</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff7">School of Biological Sciences, Nanyang Technological University, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>School of Biological Sciences, Nanyang Technological University</wicri:regionArea><wicri:noRegion>Nanyang Technological University</wicri:noRegion></affiliation></author><author><name sortKey="Webby, Richard J" sort="Webby, Richard J" uniqKey="Webby R" first="Richard J." last="Webby">Richard J. Webby</name><affiliation wicri:level="2"><nlm:aff id="aff3">Virology Division, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Virology Division, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Wentworth, David E" sort="Wentworth, David E" uniqKey="Wentworth D" first="David E." last="Wentworth">David E. Wentworth</name><affiliation wicri:level="2"><nlm:aff id="aff4">J. Craig Venter Institute, Rockville, Maryland, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>J. Craig Venter Institute, Rockville, Maryland</wicri:regionArea><placeName><region type="state">Maryland</region></placeName></affiliation></author><author><name sortKey="Fouchier, Ron A M" sort="Fouchier, Ron A M" uniqKey="Fouchier R" first="Ron A. M." last="Fouchier">Ron A. M. Fouchier</name><affiliation wicri:level="3"><nlm:aff id="aff2">Department of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, Rotterdam</wicri:regionArea><placeName><settlement type="city">Rotterdam</settlement><region nuts="2" type="province">Hollande-Méridionale</region></placeName></affiliation></author><author><name sortKey="Bahl, Justin" sort="Bahl, Justin" uniqKey="Bahl J" first="Justin" last="Bahl">Justin Bahl</name><affiliation wicri:level="1"><nlm:aff id="aff1">Duke-NUS Graduate Medical School, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>Duke-NUS Graduate Medical School</wicri:regionArea></affiliation><affiliation wicri:level="2"><nlm:aff id="aff8">Center for Infectious Diseases, The University of Texas School of Public Health, Houston, Texas, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Center for Infectious Diseases, The University of Texas School of Public Health, Houston, Texas</wicri:regionArea><placeName><region type="state">Texas</region></placeName></affiliation></author><author><name sortKey="Smith, Gavin J D" sort="Smith, Gavin J D" uniqKey="Smith G" first="Gavin J. D." last="Smith">Gavin J. D. Smith</name><affiliation wicri:level="1"><nlm:aff id="aff1">Duke-NUS Graduate Medical School, Singapore</nlm:aff><country xml:lang="fr">Singapour</country><wicri:regionArea>Duke-NUS Graduate Medical School</wicri:regionArea></affiliation><affiliation wicri:level="2"><nlm:aff id="aff9">Duke Global Health Institute, Duke University, Durham, North Carolina, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Duke Global Health Institute, Duke University, Durham, North Carolina</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation></author></analytic><series><title level="j">Journal of Virology</title><idno type="ISSN">0022-538X</idno><idno type="eISSN">1098-5514</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adaptation, Biological</term><term>Animals</term><term>Birds</term><term>Disease Outbreaks</term><term>Evolution, Molecular</term><term>Genetic Variation</term><term>Humans</term><term>Influenza A Virus, H2N2 Subtype (genetics)</term><term>Influenza in Birds (epidemiology)</term><term>Influenza in Birds (virology)</term><term>Influenza, Human (epidemiology)</term><term>Influenza, Human (virology)</term><term>Molecular Sequence Data</term><term>RNA, Viral (genetics)</term><term>Sequence Analysis, DNA</term><term>Zoonoses (epidemiology)</term><term>Zoonoses (virology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Adaptation biologique</term><term>Analyse de séquence d'ADN</term><term>Animaux</term><term>Données de séquences moléculaires</term><term>Flambées de maladies</term><term>Grippe chez les oiseaux (virologie)</term><term>Grippe chez les oiseaux (épidémiologie)</term><term>Grippe humaine (virologie)</term><term>Grippe humaine (épidémiologie)</term><term>Humains</term><term>Oiseaux</term><term>Sous-type H2N2 du virus de la grippe A (génétique)</term><term>Variation génétique</term><term>Zoonoses (virologie)</term><term>Zoonoses (épidémiologie)</term><term>Évolution moléculaire</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Influenza in Birds</term><term>Influenza, Human</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Influenza A Virus, H2N2 Subtype</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Sous-type H2N2 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Grippe chez les oiseaux</term><term>Grippe humaine</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Influenza in Birds</term><term>Influenza, Human</term><term>Zoonoses</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Grippe chez les oiseaux</term><term>Grippe humaine</term><term>Zoonoses</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adaptation, Biological</term><term>Animals</term><term>Birds</term><term>Disease Outbreaks</term><term>Evolution, Molecular</term><term>Genetic Variation</term><term>Humans</term><term>Molecular Sequence Data</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adaptation biologique</term><term>Analyse de séquence d'ADN</term><term>Animaux</term><term>Données de séquences moléculaires</term><term>Flambées de maladies</term><term>Humains</term><term>Oiseaux</term><term>Variation génétique</term><term>Évolution moléculaire</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The 1957 A/H2N2 influenza virus caused an estimated 2 million fatalities during the pandemic. Since viruses of the H2 subtype continue to infect avian species and pigs, the threat of reintroduction into humans remains. To determine factors involved in the zoonotic origin of the 1957 pandemic, we performed analyses on genetic sequences of 175 newly sequenced human and avian H2N2 virus isolates and all publicly available influenza virus genomes.</p></div></front></TEI><affiliations><list><country><li>Pays-Bas</li><li>Singapour</li><li>États-Unis</li></country><region><li>Caroline du Nord</li><li>Hollande-Méridionale</li><li>Maryland</li><li>Tennessee</li><li>Texas</li></region><settlement><li>Rotterdam</li></settlement><orgName><li>Université nationale de Singapour</li></orgName></list><tree><country name="Singapour"><noRegion><name sortKey="Joseph, Udayan" sort="Joseph, Udayan" uniqKey="Joseph U" first="Udayan" last="Joseph">Udayan Joseph</name></noRegion><name sortKey="Bahl, Justin" sort="Bahl, Justin" uniqKey="Bahl J" first="Justin" last="Bahl">Justin Bahl</name><name sortKey="Linster, Martin" sort="Linster, Martin" uniqKey="Linster M" first="Martin" last="Linster">Martin Linster</name><name sortKey="Maurer Stroh, Sebastian" sort="Maurer Stroh, Sebastian" uniqKey="Maurer Stroh S" first="Sebastian" last="Maurer-Stroh">Sebastian Maurer-Stroh</name><name sortKey="Maurer Stroh, Sebastian" sort="Maurer Stroh, Sebastian" uniqKey="Maurer Stroh S" first="Sebastian" last="Maurer-Stroh">Sebastian Maurer-Stroh</name><name sortKey="Smith, Gavin J D" sort="Smith, Gavin J D" uniqKey="Smith G" first="Gavin J. D." last="Smith">Gavin J. D. Smith</name><name sortKey="Suzuki, Yuka" sort="Suzuki, Yuka" uniqKey="Suzuki Y" first="Yuka" last="Suzuki">Yuka Suzuki</name><name sortKey="Vijaykrishna, Dhanasekaran" sort="Vijaykrishna, Dhanasekaran" uniqKey="Vijaykrishna D" first="Dhanasekaran" last="Vijaykrishna">Dhanasekaran Vijaykrishna</name><name sortKey="Vijaykrishna, Dhanasekaran" sort="Vijaykrishna, Dhanasekaran" uniqKey="Vijaykrishna D" first="Dhanasekaran" last="Vijaykrishna">Dhanasekaran Vijaykrishna</name></country><country name="Pays-Bas"><region name="Hollande-Méridionale"><name sortKey="Linster, Martin" sort="Linster, Martin" uniqKey="Linster M" first="Martin" last="Linster">Martin Linster</name></region><name sortKey="Bestebroer, Theo M" sort="Bestebroer, Theo M" uniqKey="Bestebroer T" first="Theo M." last="Bestebroer">Theo M. Bestebroer</name><name sortKey="Fouchier, Ron A M" sort="Fouchier, Ron A M" uniqKey="Fouchier R" first="Ron A. M." last="Fouchier">Ron A. M. Fouchier</name></country><country name="États-Unis"><region name="Tennessee"><name sortKey="Krauss, Scott" sort="Krauss, Scott" uniqKey="Krauss S" first="Scott" last="Krauss">Scott Krauss</name></region><name sortKey="Bahl, Justin" sort="Bahl, Justin" uniqKey="Bahl J" first="Justin" last="Bahl">Justin Bahl</name><name sortKey="Fabrizio, Thomas P" sort="Fabrizio, Thomas P" uniqKey="Fabrizio T" first="Thomas P." last="Fabrizio">Thomas P. Fabrizio</name><name sortKey="Halpin, Rebecca A" sort="Halpin, Rebecca A" uniqKey="Halpin R" first="Rebecca A." last="Halpin">Rebecca A. Halpin</name><name sortKey="Smith, Gavin J D" sort="Smith, Gavin J D" uniqKey="Smith G" first="Gavin J. D." last="Smith">Gavin J. D. Smith</name><name sortKey="Webby, Richard J" sort="Webby, Richard J" uniqKey="Webby R" first="Richard J." last="Webby">Richard J. Webby</name><name sortKey="Wentworth, David E" sort="Wentworth, David E" uniqKey="Wentworth D" first="David E." last="Wentworth">David E. 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